miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Sebastes rastrelliger



ABOUT THIS RECORD

ID: MNEST009843
species: Sebastes rastrelliger
miRNA family: miR-3201
source: miRNEST

Taxonomy by NCBI:
Sebastes rastrelliger Sebastes Sebastinae Sebastidae Scorpaenoidei Scorpaeniformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGATATAAAGAAAAATCAAA

miRNA*
CTGACTTTATTTATTTCCACA

mismatches: 3
bulges: 2

View larger
pre-miRNA
TTTGGAGAAAACATGAATGTGTTCTGACTTTATTTATTTCCACACAATGAGGCTCAAACAAGAAAAGATTTAACTGGATATAAAGAAAAATCAAACAAAC
GTTAGTTTCACTGGA


dot-bracket secondary structure
..((((((.((.(((((.((......))))))))).))))))..((.(((((((..(((.......(((((..((........))..)))))........
)))))))))).))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;